Publications

Oakley, C.G., D.W. Schemske, J.K. McKay, and J. Ågren. 2023. Ecological genetics of local adaptation in Arabidopsis: an 8-year field experiment. Molecular Ecology In press.

Link (open access)


Soto, T.Y., J. D. Rojas-Gutierrez, and C.G. Oakley. Inbreeding depression, heterosis, and outbreeding depression in the cleistogamous perennial Ruellia humilis. Submitted

bioRxiv preprint


Soto, T.Y., N.A. Ryan, and C.G. Oakley. Relative energetic economy of cleistogamous selfing in three populations of the perennial Ruellia humilis

bioRxiv preprint


Rojas-Gutierrez, J.D., G. Lee, B.J. Sanderson, M.I. Jameel, and C.G. Oakley. 2022. Genome-wide association analysis of freezing tolerance in soft red winter wheat. Crop Science 62:637-647.

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Ellis, T.J., F.M. Postma, C.G. Oakley, and J. Ågren. 2021. Number of seeds per fruit, life history tradeoffs, and the genetic basis of fitness in Arabidopsis thaliana. Molecular Ecology 30:2846-2858.

Link (open access)


Sanderson, B.J., S. Park, M. I. Jameel, J. C. Kraft, M. F. Thomashow, D. W. Schemske, and C. G. Oakley. 2020. Genetic and physiological mechanisms of freezing tolerance in locally adapted populations of a winter annual. American Journal of Botany 107:1-12.

Link (open access)


Oakley, C.G., S. Lundemo, J. Ågren, and D.W. Schemske. 2019. Heterosis is common and inbreeding depression absent in natural populations of Arabidopsis thaliana. Journal of Evolutionary Biology 35:592-603.

Link (open access)


Price, N., B.T. Moyers, L. Lopez, J.R. Lasky, G. Monroe, J.L. Mullen, C.G. Oakley, J. Lin, J. Ågren, D.R. Schrider, A.D. Kern, and J.K. McKay. 2018. Combining population genomics and fitness QTLs to identify the genetics of local adaptation in Arabidopsis thaliana. Proceedings of the National Academy of Sciences, USA. 115:5028-5033.

Link (open access)


Oakley, C.G., L. Savage, S. Lotz, R. Larson, M.F. Thomashow, D.W. Schemske, and D.M. Kramer. 2018. Genetic basis of photosynthetic responses to low temperature in locally adapted population of Arabidopsis thaliana. Journal of Experimental Botany 69:699-709.

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Ågren, J., C.G. Oakley, S. Lundemo, and D.W. Schemske. 2017. Adaptive divergence in flowering time among natural populations of Arabidopsis thaliana: QTL mapping and estimates of selection. Evolution 71:550-564.

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Mojica, J.P., J. Mullen, J.T. Lovell, C.G. Oakley, and J.K. McKay. 2016. Genetics of water use physiology in locally adapted Arabidopsis thaliana. Plant Science 251:12-22.

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Dittmar, E.D*., C.G. Oakley*, B.A. Gould, J.K. Connor, and D.W. Schemske. 2016. Factors influencing the effect size distribution of adaptive substitutions. Proceedings of the Royal Society B: Biological Sciences 283:20153065  *co-first authors

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Oakley, C.G., J. P. Spoelhof, and D.W. Schemske. 2015. Increased heterosis in selfing populations of a perennial forb. AoB Plants 7:plv122

PDF    Supplementary info


Oakley, C.G., J. Ågren, and D.W. Schemske. 2015. Heterosis and outbreeding depression in crosses between natural populations of Arabidopsis thaliana. Heredity 115:73-82.

PDF    Supplementary info    Data


Oakley, C.G. 2015. The influence of natural variation in population size on ecological and quantitative genetics of the endangered endemic plant Hypericum cumulicola. International Journal of Plant Sciences 176:11-19

PDF    Supplementary info


Oakley, C.G., J. Ågren, R.A. Atchison, and D.W. Schemske. 2014. QTL mapping of freezing tolerance: links to fitness and adaptive trade-offs. Molecular Ecology 23: 4304-4315.

PDF    Supplementary info    Data & R/qtl code


Dittmar, E., C.G. Oakley, J. Ågren, and D.W. Schemske. 2014. Flowering time QTL in natural populations of Arabidopsis thaliana and implications for their adaptive value. Molecular Ecology 23: 4291-4303.

PDF    Supplementary info    Data


Ågren, J., C.G. Oakley, J.K. McKay, J.T. Lovell, and D.W. Schemske. 2013. Genetic mapping of adaptation reveals fitness trade-offs in Arabidopsis thaliana. Proceedings of the National Academy of Sciences, USA 110: 21077-21082.                      

PDF    Supplementary info


Oakley, C.G. 2013. Small effective size limits performance in a novel environment. Evolutionary Applications 6: 823-831.

PDF    Supplementary info    Data


Oakley, C.G. and A.A. Winn. 2012. Effects of population size and isolation on heterosis, mean fitness, and inbreeding depression in a perennial plant. New Phytologist 196: 261-270.

PDF    Supplementary info    Data

  

Oakley, C.G. and A.A. Winn. 2008. Population and family level inbreeding depression in the cleistogamous perennial Viola septemloba. International Journal of Plant Sciences169: 523-530.

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Oakley, C.G., K.S. Moriuchi, and A.A. Winn. 2007. The maintenance of outcrossing in predominantly selfing species: ideas and evidence from cleistogamous species. Annual Review of Ecology, Evolution, and Systematics 38: 437-457.

PDF    Supplementary info



Non-peer reviewed publication


Oakley, C.G. 2015. The genetic consequences of small population size in the endangered plant Hypericum cumulicola (Small) P.B. Adams (Hypericaceae). Palmetto: The Quarterly Journal of the Florida Native Plant Society 31:4-7.


For the most up to date list of publications please see my Google Scholar Page